Sema6d - SNV Details



 Gene Information 
Gene Name Sema6d
Old Gene Names for Sema6d Aa409156 , 1110067b02rik
Gene Description sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:MGI Symbol;Acc:MGI:2387661]
Uniprot Name
CCDS Name
Gene GO
cell differentiation; semaphorin receptor binding; membrane; nervous system development; integral to membrane; receptor activity; protein binding; plasma membrane; biological_process; multicellular organismal development; Golgi apparatus
Homolog in other species SEMA6D
Immgen Expression
LOW/MEDIAN(HIGH IN MF.RP.SP)
Gnf Expression
MEDIAN(HIGH IN NS GROUP, IMM.G1, IMM.G3, OSTEO GROUP, EPITH GROUP, EMB GROUP)
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000027200
Chromosome 2
Coordinate 124,653,642     (Assembly: GRCm38)    
Ref Base T
Codon Change tTc/tAc
Var Base A
Zygosity Heterozygous
Read Depth 93
Allele Frequency
T:R0.40
A:V0.60
Amino Acid Position 3
Amino Acid Change F->Y (Phenylalanine -> Tyrosine)
Sample ID IGL01457
Median Base Quality 33
Backgrounds Balb/c:C57BL/6
Source Walter and Eliza Hall Institute (WEHI-G1)
Other variants in this mouse 58 Other Mutations

 Predictions 
Polyphen Score 0
Polyphen Prediction Unknown
Sift Score 0.12
Sift Prediction tolerated

 Availability Details 
Availability Cryopreserved