5430419D17Rik - SNV Details



 Gene Information 
Gene Name 5430419d17rik
Gene Description RIKEN cDNA 5430419D17 gene [Source:MGI Symbol;Acc:MGI:1918645]
Uniprot Name
CCDS Name
Gene GO
membrane; extracellular region; biological_process; scavenger receptor activity
Immgen Expression
MEDIAN(LOWER IN DC8+.TH, TGD.VG5+.ACT.IEL)
Gnf Expression
LOW/MEDIAN
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000006204
Chromosome 7
Coordinate 131,246,703     (Assembly: GRCm38)    
Ref Base A
Codon Change aAc/aTc
Var Base T
Zygosity Heterozygous
Read Depth 31
Allele Frequency
A:R0.52
T:V0.48
Amino Acid Position 746
Amino Acid Change N->I (Asparagine -> Isoleucine)
Sample ID IGL01286
Median Base Quality 39
Backgrounds C57BL/6NCrl
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 31 Other Mutations

 Predictions 
Polyphen Score 1
Polyphen Prediction Probably damaging
Sift Score 0
Sift Prediction deleterious

 Protein domains 
ENSMUSP00000061529:
Image provided by Ensembl

Full name Short name Interpro SeqRegionName Type Start End Description Search pathways
SRCR domain Srcr_rcpt IPR001190 ENSMUSP00000061529 Pfam 684
780 Description available Search pathways
Speract/scavenger receptor-related Srcr_rcpt-rel IPR017448 ENSMUSP00000061529 Superfamily 674
789 Description available Search pathways
SRCR domain Srcr_rcpt IPR001190 ENSMUSP00000061529 Prints 745
759 Description available Search pathways
Speract/scavenger receptor-related Srcr_rcpt-rel IPR017448 ENSMUSP00000061529 Smart 680
780 Description available Search pathways
SRCR domain Srcr_rcpt IPR001190 ENSMUSP00000061529 Prosite_profiles 680
780 Description available Search pathways

 Availability Details 
Availability Progeny Cryopreserved