Zfp580 - SNV Details



 Gene Information 
Gene Name Zfp580
Old Gene Names for Zfp580 1500015o20rik , Ai838225
Gene Description zinc finger protein 580 [Source:MGI Symbol;Acc:MGI:1916242]
Uniprot Name
CCDS Name
Gene GO
transcription
DNA-dependent; intracellular; zinc ion binding; DNA binding; nucleus; regulation of transcription
DNA-dependent; biological_process
Homolog in other species ZNF580
Immgen Expression
MEDIAN
Gnf Expression
MEDIAN/HIGH(LOWER IN PANCREAS, KIDNEY, LIVER, BROWNFAT, SPLEEN, IMM.G2, THYROID, GI GROUP)
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000055633
Chromosome 7
Coordinate 5,053,268     (Assembly: GRCm38)    
Ref Base C
Codon Change aCc/aTc
Var Base T
Zygosity Heterozygous
Read Depth 42
Allele Frequency
C:R0.57
T:V0.43
Amino Acid Position 151
Amino Acid Change T->I (Threonine -> Isoleucine)
Sample ID IGL01154
Median Base Quality 35
Backgrounds C57BL/6n
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 55 Other Mutations

 Predictions 
Polyphen Score 0.11
Polyphen Prediction Benign
Sift Score 0.19
Sift Prediction tolerated

 Protein domains 
ENSMUSP00000065861:
Image provided by Ensembl

Full name Short name Interpro SeqRegionName Type Start End Description Search pathways
Zinc finger, C2H2-like Znf_C2H2-like IPR015880 ENSMUSP00000065861 Smart 150
172 Description available Search pathways
Zinc finger, C2H2 Znf_C2H2 IPR007087 ENSMUSP00000065861 Prosite_profiles 150
172 Description available Search pathways

 Availability Details 
Availability Progeny Cryopreserved , Cryopreserved