Gtf2ird2 - SNV Details



 Gene Information 
Gene Name Gtf2ird2
Old Gene Names for Gtf2ird2 1700012p16rik
Gene Description GTF2I repeat domain containing 2 [Source:MGI Symbol;Acc:MGI:2149780]
Uniprot Name
CCDS Name
Gene GO
regulation of transcription
DNA-templated; transition between fast and slow fiber; DNA binding; protein binding; nucleus; nucleic acid binding; transcription
DNA-templated
Immgen Expression
MEDIAN(LOWER IN MYELOID GROUP AND DC.LC.SK)
Gnf Expression
MEDIAN(HIGH IN NS GROUP)
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000015942
Chromosome 5
Coordinate 134,217,614     (Assembly: GRCm38)    
Ref Base A
Var Base T
Zygosity Heterozygous
Read Depth 20
Allele Frequency
A:R0.55
T:V0.45
Amino Acid Change M->L (Methionine -> Leucine)
Sample ID IGL02992
Median Base Quality 41
Backgrounds C57BL/6n
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 48 Other Mutations

 Predictions 
Polyphen Score 0.11
Polyphen Prediction Benign

 Availability Details 
Availability Progeny Cryopreserved