Phf20l1 - SNV Details



 Gene Information 
Gene Name Phf20l1
Old Gene Names for Phf20l1 E130113k22rik
Gene Description PHD finger protein 20-like 1 [Source:MGI Symbol;Acc:MGI:2444412]
Uniprot Name
CCDS Name
Gene GO
zinc ion binding; protein binding; cellular_component; biological_process; molecular_function
Homolog in other species PHF20L1
Immgen Expression
MEDIAN(LOW IN PROB.FRBC.FL, DC8+.TH, DC.LC.SK)
MEDIAN(LOW IN PROB.FRBC.FL, DC8+.TH, DC.LC.SK)
Gnf Expression
MEDIAN
HIGH
HIGH
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000072501
Chromosome 15
Coordinate 66,595,151     (Assembly: GRCm38)    
Ref Base A
Var Base G
Zygosity Heterozygous
Read Depth 28
Allele Frequency
A:R0.57
G:V0.43
Amino Acid Change T->A (Threonine -> Alanine)
Sample ID IGL02940
Median Base Quality 38
Backgrounds C57BL/6n
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 34 Other Mutations

 Predictions 
Polyphen Score 0.39
Polyphen Prediction Benign

 Availability Details 
Availability Progeny Cryopreserved