Gtf3c1 - SNV Details



 Gene Information 
Gene Name Gtf3c1
Gene Description general transcription factor III C 1 [Source:MGI Symbol;Acc:MGI:107887]
Uniprot Name
CCDS Name
Gene GO
transcription factor TFIIIC complex; membrane; DNA binding; protein binding; nucleus; ribonucleoprotein complex; nucleolus; transcription
DNA-templated
Homolog in other species GTF3C1
Immgen Expression
HIGH(HIGHER IN B.GC.SP, PROB.FRBC.FL, PREB.FRD.FL, TGD GROUP)
Gnf Expression
MEDIAN/HIGH(LOWER IN PANCREAS, KIDNEY, LIVER, BROWNFAT, SPLEEN, IMM.G2, THYROID, GI GROUP)
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000032777
Chromosome 7
Coordinate 125,676,512     (Assembly: GRCm38)    
Ref Base T
Var Base A
Zygosity Heterozygous
Read Depth 15
Allele Frequency
T:R0.47
A:V0.53
Amino Acid Change I->F (Isoleucine -> Phenylalanine)
Sample ID IGL02750
Median Base Quality 36
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 50 Other Mutations

 Predictions 
Polyphen Score 1
Polyphen Prediction Probably damaging

 Availability Details 
Availability Cryopreserved