Slc39a6 - SNV Details



 Gene Information 
Gene Name Slc39a6
Gene Description solute carrier family 39 (metal ion transporter), member 6 [Source:MGI Symbol;Acc:MGI:2147279]
Uniprot Name
CCDS Name
Gene GO
metal ion transmembrane transporter activity; lamellipodium membrane; membrane; zinc ion transmembrane transporter activity; endoplasmic reticulum; metal ion transport; integral to plasma membrane; zinc ion transmembrane transport; zinc ion transmembrane import; transmembrane transport; cellular zinc ion homeostasis; plasma membrane
Homolog in other species SLC39A6
Immgen Expression
MEDIAN(HIGH IN B.GC.SP, PROB.FRBC.FL, PREB.FRD.FL)
Gnf Expression
MEDIAN/HIGH(LOWER IN PANCREAS, KIDNEY, LIVER, BROWNFAT, SPLEEN, IMM.G2, THYROID, GI GROUP)
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000024270
Chromosome 18
Coordinate 24,582,367     (Assembly: GRCm38)    
Ref Base T
Var Base C
Zygosity Heterozygous
Read Depth 29
Allele Frequency
T:R0.55
C:V0.45
Amino Acid Change I->V (Isoleucine -> Valine)
Sample ID IGL02648
Median Base Quality 39
Backgrounds C57BL/6n
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 35 Other Mutations

 Predictions 
Polyphen Score 0.96
Polyphen Prediction Probably damaging

 Availability Details 
Availability Cryopreserved , Progeny Cryopreserved