Usp40 - SNV Details



 Gene Information 
Gene Name Usp40
Old Gene Names for Usp40 B230215l03rik
Gene Description ubiquitin specific peptidase 40 [Source:MGI Symbol;Acc:MGI:2443184]
Uniprot Name
CCDS Name
Gene GO
ubiquitin thiolesterase activity; ubiquitin-dependent protein catabolic process; cellular_component; cysteine-type peptidase activity
Homolog in other species USP40
Immgen Expression
HIGH(LOWER IN DC.LC.SK)
Gnf Expression
LOW
MEDIAN(HIGH IN OSTEOBLASTS)
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000005501
Chromosome 1
Coordinate 87,950,017     (Assembly: GRCm38)    
Ref Base A
Var Base G
Zygosity Heterozygous
Read Depth 127
Allele Frequency
A:R0.49
G:V0.51
Amino Acid Change V->A (Valine -> Alanine)
Sample ID IGL02625
Median Base Quality 39
Backgrounds C57BL/6n
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 49 Other Mutations

 Predictions 
Polyphen Score 0.07
Polyphen Prediction Benign
Druggable Yes, View known drug interactions

 Availability Details 
Availability Progeny Cryopreserved , Cryopreserved