Ssu72 - SNV Details



 Gene Information 
Gene Name Ssu72
Old Gene Names for Ssu72 1190002e22rik , 1500011l16rik , 2610101m12rik
Gene Description Ssu72 RNA polymerase II CTD phosphatase homolog (yeast) [Source:MGI Symbol;Acc:MGI:1916241]
Uniprot Name
CCDS Name
Gene GO
cytoplasm; mRNA polyadenylation; phosphoprotein phosphatase activity; nucleus; cellular_component; biological_process; CTD phosphatase activity; mRNA processing; dephosphorylation of RNA polymerase II C-terminal domain; molecular_function
Homolog in other species SSU72
Immgen Expression
MEDIAN(HIGHER IN MYELOID GROUP, TGD.VG5+.ACT.IEL)
Gnf Expression
HIGH(LOWER IN PANCREAS)
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000029038
Chromosome 4
Coordinate 155,705,425     (Assembly: GRCm38)    
Ref Base A
Var Base G
Zygosity Heterozygous
Read Depth 14
Allele Frequency
A:R0.43
G:V0.57
Amino Acid Change N->S (Asparagine -> Serine)
Sample ID IGL02601
Median Base Quality 35.5
Backgrounds C57BL/6n
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 51 Other Mutations

 Predictions 
Polyphen Score 0.32
Polyphen Prediction Benign

 Availability Details 
Availability