Gtf2ird2 - SNV Details



 Gene Information 
Gene Name Gtf2ird2
Old Gene Names for Gtf2ird2 1700012p16rik
Gene Description GTF2I repeat domain containing 2 [Source:MGI Symbol;Acc:MGI:2149780]
Uniprot Name
CCDS Name
Gene GO
transcription
DNA-dependent; DNA binding; nucleus; cellular_component; regulation of transcription
DNA-dependent; nucleic acid binding; biological_process; molecular_function
Homolog in other species GTF2IRD2
Immgen Expression
MEDIAN(LOWER IN MYELOID GROUP AND DC.LC.SK)
Gnf Expression
MEDIAN(HIGH IN NS GROUP)
Novel Yes

 Mutation Information 
Mutation Type Splice
Ensembl ID ENSMUSG00000015942
Chromosome 5
Coordinate 134,213,048     (Assembly: GRCm38)    
Ref Base G
Var Base T
Zygosity Heterozygous
Read Depth 13
Allele Frequency
G:R0.62
T:V0.38
Amino Acid Change Disrupted splicing
Splice Position 4
Sample ID IGL02567
Median Base Quality 39
Backgrounds C57BL/6n
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 48 Other Mutations

 Predictions 

 Availability Details 
Availability Cryopreserved , Progeny Cryopreserved