Fam21 - SNV Details



 Gene Information 
Gene Name Fam21
Old Gene Names for Fam21 D6wsu116e , C530005j20rik
Gene Description DNA segment, Chr 6, Wayne State University 116, expressed [Source:MGI Symbol;Acc:MGI:106463]
Uniprot Name
CCDS Name
Gene GO
early endosome; retrograde transport
endosome to Golgi; early endosome membrane; WASH complex; molecular_function
Homolog in other species FAM21C
Immgen Expression
HIGH
Gnf Expression
MEDIAN/HIGH(LOWER IN PANCREAS, KIDNEY, LIVER, BROWNFAT, SPLEEN, IMM.G2, THYROID, GI GROUP)
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000024104
Chromosome 6
Coordinate 116,209,100     (Assembly: GRCm38)    
Ref Base T
Var Base A
Zygosity Heterozygous
Read Depth 32
Allele Frequency
T:R0.44
A:V0.56
Amino Acid Change N->K (Asparagine -> Lysine)
Sample ID IGL02555
Median Base Quality 39
Backgrounds C57BL/6NCrl
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 34 Other Mutations

 Predictions 
Polyphen Score 1
Polyphen Prediction Probably damaging

 Availability Details 
Availability Progeny Cryopreserved , Cryopreserved