Pabpc1l - SNV Details



 Gene Information 
Gene Name Pabpc1l
Old Gene Names for Pabpc1l 1810053b01rik
Gene Description poly(A) binding protein, cytoplasmic 1-like [Source:MGI Symbol;Acc:MGI:1922908]
Uniprot Name
CCDS Name
Gene GO
RNA binding; cellular_component; nucleotide binding; nucleic acid binding; biological_process; molecular_function
Homolog in other species PABPC1L
Immgen Expression
MEDIAN(HIGHER IN NK GROUP, T.DPSM.TH, T.8EFF.SP.OT1.D6.VSVOVA, T.8MEM.LN,TGD.SP,T.4FP3+25+.SP,T.4NVE.PP)
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000054582
Chromosome 2
Coordinate 164,027,490     (Assembly: GRCm38)    
Ref Base A
Var Base G
Zygosity Heterozygous
Read Depth 61
Allele Frequency
A:R0.62
G:V0.38
Amino Acid Change D->G (Aspartic acid -> Glycine)
Sample ID IGL02534
Median Base Quality 39
Backgrounds C57BL/6NCrl
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 33 Other Mutations

 Predictions 
Polyphen Score 0.98
Polyphen Prediction Probably damaging

 Availability Details 
Availability Cryopreserved , Progeny Cryopreserved