Gpatch2l - SNV Details



 Gene Information 
Gene Name Gpatch2l
Old Gene Names for Gpatch2l 1700020o03rik
Gene Description RIKEN cDNA 1700020O03 gene [Source:MGI Symbol;Acc:MGI:1917623]
Uniprot Name
CCDS Name
Gene GO
cellular_component; biological_process; molecular_function
Homolog in other species C14ORF118
Immgen Expression
MEDIAN(LOW IN PROB.FRBC.FL, DC8+.TH, DC.LC.SK)
Gnf Expression
LOW/MEDIAN(HIGH IN FERTILIZEDEGG, OOCYTE)
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000021254
Chromosome 12
Coordinate 86,288,961     (Assembly: GRCm38)    
Ref Base A
Codon Change Acc/Gcc
Var Base G
Zygosity Heterozygous
Read Depth 17
Allele Frequency
A:R0.53
G:V0.47
Amino Acid Position 479
Amino Acid Change T->A (Threonine -> Alanine)
Sample ID IGL02458
Median Base Quality 38
Backgrounds C57BL/6NCrl
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 69 Other Mutations

 Predictions 
Polyphen Score 0
Polyphen Prediction Benign
Sift Score 0.1
Sift Prediction tolerated

 Availability Details 
Availability Progeny Cryopreserved