Cdh16 - SNV Details



 Gene Information 
Gene Name Cdh16
Gene Description cadherin 16 [Source:MGI Symbol;Acc:MGI:106671]
Uniprot Name
CCDS Name
Gene GO
membrane; integral to membrane; homophilic cell adhesion; plasma membrane; calcium ion binding
Homolog in other species CDH16
Omim http://omim.org/entry/603118
Immgen Expression
MEDIAN(LOWER IN DC8+.TH, TGD.VG5+.ACT.IEL)
Gnf Expression
HIGH
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000031881
Chromosome 8
Coordinate 104,621,974     (Assembly: GRCm38)    
Ref Base T
Codon Change Acc/Gcc
Var Base C
Zygosity Heterozygous
Read Depth 91
Allele Frequency
T:R0.52
C:V0.48
Amino Acid Position 141
Amino Acid Change T->A (Threonine -> Alanine)
Sample ID IGL02390
Median Base Quality 39
Backgrounds C57BL/6NCrl
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 52 Other Mutations

 Predictions 
Polyphen Score 0.97
Polyphen Prediction Probably damaging
Sift Score 0.05
Sift Prediction deleterious

 Availability Details 
Availability Progeny Cryopreserved , Cryopreserved