Zcchc11 - SNV Details



 Gene Information 
Gene Name Zcchc11
Old Gene Names for Zcchc11 9230115f04rik , 6030404k05rik
Gene Description zinc finger, CCHC domain containing 11 [Source:MGI Symbol;Acc:MGI:2445126]
Uniprot Name
CCDS Name
Gene GO
miRNA catabolic process; RNA 3'-end processing; cytoplasm; miRNA metabolic process; negative regulation of NF-kappaB transcription factor activity; stem cell maintenance; zinc ion binding; positive regulation of interleukin-6 production; protein binding; pre-miRNA processing; nucleus; regulation of lipopolysaccharide-mediated signaling pathway; nucleotidyltransferase activity; nucleic acid binding; cytokine production; RNA uridylyltransferase activity; nucleolus; interleukin-6-mediated signaling pathway
Homolog in other species ZCCHC11
Omim http://omim.org/entry/613692
Immgen Expression
HIGH
Gnf Expression
MEDIAN(HIGH IN IMM.G1, IMM.G3)
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000034610
Chromosome 4
Coordinate 108,529,276     (Assembly: GRCm38)    
Ref Base C
Codon Change taC/taA
Var Base A
Zygosity Heterozygous
Read Depth 43
Allele Frequency
C:R0.49
A:V0.51
Amino Acid Position 1114
Amino Acid Change Y->Stop (Tyrosine -> Stop)
Sample ID IGL02451
Median Base Quality 40
Backgrounds C57BL/6NCrl
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 50 Other Mutations

 Predictions 
Polyphen Prediction N/A

 Availability Details 
Availability Progeny Cryopreserved