F5 - SNV Details



 Human Rare Diseases 
Congenital factor V deficiency
Budd-Chiari syndrome

 Gene Information 
Gene Name F5
Old Gene Names for F5 Cf5 , Cf-5 , Ai173222
Gene Description coagulation factor V [Source:MGI Symbol;Acc:MGI:88382]
Uniprot Name
CCDS Name
Gene GO
cell adhesion; blood coagulation; protein binding; platelet alpha granule; copper ion binding; blood circulation; extracellular space
Homolog in other species F5
Omim http://omim.org/entry/612309
Immgen Expression
LOW(HIGH IN GN.BM, DC.LC.SK, MF.THIO5.II-480HI.PC, MO.6C+II-.LN)
Gnf Expression
LOW/MEDIAN(HIGH IN KIDNEY, LIVER, SMALLINTESTINE)
LOW/MEDIAN(HIGH IN KIDNEY, LIVER, SMALLINTESTINE)
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000026579
Chromosome 1
Coordinate 164,191,929     (Assembly: GRCm38)    
Ref Base A
Codon Change Act/Gct
Var Base G
Zygosity Heterozygous
Read Depth 22
Allele Frequency
A:R0.64
G:V0.36
Amino Acid Position 658
Amino Acid Change T->A (Threonine -> Alanine)
Sample ID IGL02415
Median Base Quality 39
Backgrounds C57BL/6NCrl
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 52 Other Mutations

 Predictions 
Polyphen Score 1
Polyphen Prediction Probably damaging
Sift Score 0.3
Sift Prediction tolerated

 Availability Details 
Availability Progeny Cryopreserved