Slc39a6 - SNV Details



 Gene Information 
Gene Name Slc39a6
Gene Description solute carrier family 39 (metal ion transporter), member 6 [Source:MGI Symbol;Acc:MGI:2147279]
Uniprot Name
CCDS Name
Gene GO
metal ion transmembrane transporter activity; lamellipodium membrane; membrane; zinc ion transmembrane transporter activity; endoplasmic reticulum; metal ion transport; integral to plasma membrane; zinc ion transmembrane transport; zinc ion import; transmembrane transport; cellular zinc ion homeostasis; plasma membrane
Homolog in other species SLC39A6
Immgen Expression
MEDIAN(HIGH IN B.GC.SP, PROB.FRBC.FL, PREB.FRD.FL)
Gnf Expression
MEDIAN/HIGH(LOWER IN PANCREAS, KIDNEY, LIVER, BROWNFAT, SPLEEN, IMM.G2, THYROID, GI GROUP)
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000024270
Chromosome 18
Coordinate 24,589,823     (Assembly: GRCm38)    
Ref Base A
Codon Change gaT/gaA
Var Base T
Zygosity Heterozygous
Read Depth 63
Allele Frequency
A:R0.51
T:V0.48
Amino Acid Position 189
Amino Acid Change D->E (Aspartic acid -> Glutamic acid)
Sample ID IGL02332
Median Base Quality 38
Backgrounds C57BL/6j
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 54 Other Mutations

 Predictions 
Polyphen Score 0.34
Polyphen Prediction Benign
Sift Score 0.76
Sift Prediction tolerated

 Availability Details 
Availability Cryopreserved