Spatc1 - SNV Details



 Gene Information 
Gene Name Spatc1
Old Gene Names for Spatc1 1700084j23rik
Gene Description spermatogenesis and centriole associated 1 [Source:MGI Symbol;Acc:MGI:1921531]
Uniprot Name
CCDS Name
Gene GO
cytoplasm; protein binding; gamma-tubulin binding; biological_process; centrosome
Homolog in other species SPATC1
Omim http://omim.org/entry/610874
Immgen Expression
LOW(HIGH IN GN.BM, DC.LC.SK, MF.THIO5.II-480HI.PC, MO.6C+II-.LN)
MEDIAN(HIGHER IN NK GROUP, T.8MEM.LN, TGD.SPT.4NVE.PP, T.4FP3+25+.SP)
Gnf Expression
LOW(HIGH IN TESTIS)
Novel Yes

 Mutation Information 
Mutation Type Splice
Ensembl ID ENSMUSG00000049653
Chromosome 15
Coordinate 76,283,539     (Assembly: GRCm38)    
Ref Base T
Var Base C
Zygosity Heterozygous
Read Depth 37
Allele Frequency
T:R0.43
C:V0.57
Amino Acid Change Disrupted splicing
Splice Position 9
Sample ID IGL02215
Median Base Quality 38
Backgrounds C57BL/6NCrl
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 55 Other Mutations

 Predictions 

 Availability Details 
Availability Progeny Cryopreserved