Vps28 - SNV Details



 Gene Information 
Gene Name Vps28
Old Gene Names for Vps28 1110014j03rik , Ai847241 , D730005c08rik
Gene Description vacuolar protein sorting 28 (yeast) [Source:MGI Symbol;Acc:MGI:1914164]
Uniprot Name
CCDS Name
Gene GO
cytoplasm; protein transport; protein binding; endosome; cytosol; late endosome membrane; negative regulation of protein ubiquitination; plasma membrane
Homolog in other species VPS28
Omim http://omim.org/entry/611952
Immgen Expression
HIGH
Gnf Expression
HIGH(LOWER IN FERTILIZED EGG AND OOCYTE)
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000062381
Chromosome 15
Coordinate 76,623,178     (Assembly: GRCm38)    
Ref Base A
Codon Change gTt/gAt
Var Base T
Zygosity Heterozygous
Read Depth 79
Allele Frequency
A:R0.48
T:V0.51
Amino Acid Position 132
Amino Acid Change V->D (Valine -> Aspartic acid)
Sample ID IGL02189
Median Base Quality 37
Backgrounds C57BL/6NCrl
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 53 Other Mutations

 Predictions 
Polyphen Score 0.69
Polyphen Prediction Possibly damaging
Sift Score 0
Sift Prediction deleterious

 Availability Details 
Availability Progeny Cryopreserved