Trim40 - SNV Details



 Gene Information 
Gene Name Trim40
Old Gene Names for Trim40 Gm865 , Gm35 , Gm319
Gene Description tripartite motif-containing 40 [Source:MGI Symbol;Acc:MGI:2684881]
Uniprot Name
CCDS Name
Gene GO
intracellular; zinc ion binding; protein binding; cellular_component; biological_process
Homolog in other species TRIM40
Immgen Expression
MEDIAN(LOWER IN DC8+.TH, TGD.VG5+.ACT.IEL)
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000073399
Chromosome 17
Coordinate 36,889,178     (Assembly: GRCm38)    
Ref Base A
Codon Change Tct/Cct
Var Base G
Zygosity Heterozygous
Read Depth 28
Allele Frequency
A:R0.61
G:V0.39
Amino Acid Position 3
Amino Acid Change S->P (Serine -> Proline)
Sample ID IGL02071
Median Base Quality 36.5
Backgrounds C57BL/6NCrl
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 40 Other Mutations

 Predictions 
Polyphen Score 0
Polyphen Prediction Benign
Sift Score 1
Sift Prediction tolerated

 Availability Details 
Availability