H2-M9 - SNV Details



 Gene Information 
Gene Name H2-m9
Gene Description histocompatibility 2, M region locus 9 [Source:MGI Symbol;Acc:MGI:1276570]
Uniprot Name
CCDS Name
Gene GO
membrane; MHC class I protein complex; immune response; antigen processing and presentation; protein binding; cellular_component; biological_process; molecular_function
Immgen Expression
MEDIAN(HIGHER IN NK GROUP, T.DPSM.TH, T.8EFF.SP.OT1.D6.VSVOVA, T.8MEM.LN,TGD.SP,T.4FP3+25+.SP,T.4NVE.PP)
Gnf Expression
MEDIAN
LOW/MEDIAN
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000067201
Chromosome 17
Coordinate 36,641,737     (Assembly: GRCm38)    
Ref Base T
Codon Change gAa/gGa
Var Base C
Zygosity Heterozygous
Read Depth 98
Allele Frequency
T:R0.58
C:V0.42
Amino Acid Position 139
Amino Acid Change E->G (Glutamic acid -> Glycine)
Sample ID IGL02133
Median Base Quality 39
Backgrounds C57BL/6NCrl
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 34 Other Mutations

 Predictions 
Polyphen Score 0.8
Polyphen Prediction Possibly damaging
Sift Score 0.01
Sift Prediction deleterious

 Availability Details 
Availability Cryopreserved , Progeny Cryopreserved