Trank1 - SNV Details



 Gene Information 
Gene Name Trank1
Old Gene Names for Trank1 C030048j01rik , A230061d21rik , Gm187 , Lba1
Gene Description tetratricopeptide repeat and ankyrin repeat containing 1 [Source:MGI Symbol;Acc:MGI:1341834]
Uniprot Name
CCDS Name
Gene GO
protein binding; cellular_component; ATP binding; biological_process; molecular_function
Homolog in other species TRANK1
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000062296
Chromosome 9
Coordinate 111,390,712     (Assembly: GRCm38)    
Ref Base C
Codon Change gaC/gaA
Var Base A
Zygosity Heterozygous
Read Depth 25
Allele Frequency
C:R0.48
A:V0.52
Amino Acid Position 2172
Amino Acid Change D->E (Aspartic acid -> Glutamic acid)
Sample ID IGL02104
Median Base Quality 39
Backgrounds C57BL/6NCrl
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 53 Other Mutations

 Predictions 
Polyphen Score 0.08
Polyphen Prediction Benign
Sift Score 0.5
Sift Prediction tolerated

 Availability Details 
Availability Cryopreserved , Progeny Cryopreserved