Cntnap5c - SNV Details



 Gene Information 
Gene Name Cntnap5c
Old Gene Names for Cntnap5c Eg620292
Gene Description contactin associated protein-like 5C [Source:MGI Symbol;Acc:MGI:3646013]
Uniprot Name
CCDS Name
Gene GO
integral to membrane; signal transduction; cell adhesion; protein binding; receptor binding
Homolog in other species CNTNAP5
Immgen Expression
LOW
MEDIAN(LOWER IN TGD.VG5+.ACT.IEL)
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000038048
Chromosome 17
Coordinate 58,410,242     (Assembly: GRCm38)    
Ref Base T
Codon Change aTg/aCg
Var Base C
Zygosity Heterozygous
Read Depth 27
Allele Frequency
T:R0.41
C:V0.59
Amino Acid Position 1273
Amino Acid Change M->T (Methionine -> Threonine)
Sample ID IGL01864
Median Base Quality 40
Backgrounds C57BL/6NCrl
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 18 Other Mutations

 Predictions 
Polyphen Score 0
Polyphen Prediction Benign
Sift Score 0.6
Sift Prediction tolerated

 Availability Details 
Availability Cryopreserved