Igdcc4 - SNV Details



 Gene Information 
Gene Name Igdcc4
Old Gene Names for Igdcc4 Nope , Wi-16786 , 9330155g14rik , Wi-18508
Gene Description immunoglobulin superfamily, DCC subclass, member 4 [Source:MGI Symbol;Acc:MGI:1858497]
Uniprot Name
CCDS Name
Gene GO
integral to plasma membrane; protein binding; biological_process; molecular_function
Homolog in other species IGDCC4
Immgen Expression
MEDIAN(HIGHER IN NK GROUP, T.8MEM.LN, TGD.SPT.4NVE.PP, T.4FP3+25+.SP)
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000032816
Chromosome 9
Coordinate 65,131,732     (Assembly: GRCm38)    
Ref Base A
Codon Change aAc/aTc
Var Base T
Zygosity Heterozygous
Read Depth 53
Allele Frequency
A:R0.36
T:V0.64
Amino Acid Position 933
Amino Acid Change N->I (Asparagine -> Isoleucine)
Sample ID IGL01751
Median Base Quality 39
Backgrounds C57BL/6NCrl
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 32 Other Mutations

 Predictions 
Polyphen Score 0.84
Polyphen Prediction Possibly damaging
Sift Score 0.04
Sift Prediction deleterious

 Protein domains 
ENSMUSP00000076878:
Image provided by Ensembl

Full name Short name Interpro SeqRegionName Type Start End Description Search pathways
Fibronectin, type III Fibronectin_type3 IPR003961 ENSMUSP00000076878 Smart 894
978 Description available Search pathways
Fibronectin, type III Fibronectin_type3 IPR003961 ENSMUSP00000076878 Pfam 896
981 Description available Search pathways
Fibronectin, type III Fibronectin_type3 IPR003961 ENSMUSP00000076878 Superfamily 883
991 Description available Search pathways
Fibronectin, type III Fibronectin_type3 IPR003961 ENSMUSP00000076878 Prosite_profiles 893
988 Description available Search pathways

 Availability Details 
Availability Cryopreserved