Gm6483 - SNV Details



 Gene Information 
Gene Name Gm6483
Old Gene Names for Gm6483 Eg624198
Gene Description predicted gene 6483 [Source:MGI Symbol;Acc:MGI:3644574]
Uniprot Name
CCDS Name
Gene GO
membrane; integral to membrane; homophilic cell adhesion; calcium ion binding
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000087153
Chromosome 8
Coordinate 19,691,613     (Assembly: GRCm38)    
Ref Base C
Codon Change Ccc/Tcc
Var Base T
Zygosity Heterozygous
Read Depth 83
Allele Frequency
C:R0.70
T:V0.30
Amino Acid Position 55
Amino Acid Change P->S (Proline -> Serine)
Sample ID IGL01710
Median Base Quality 38
Backgrounds C57BL/6NCrl
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 42 Other Mutations

 Predictions 
Polyphen Score 1
Polyphen Prediction Probably damaging
Sift Score 0.03
Sift Prediction deleterious

 Protein domains 
ENSMUSP00000116798:
Image provided by Ensembl

Full name Short name Interpro SeqRegionName Type Start End Description Search pathways
Cadherin-like Cadherin-like IPR015919 ENSMUSP00000116798 Superfamily 23
110 Description available Search pathways
Cadherin Cadherin IPR002126 ENSMUSP00000116798 Pfam 23
107 Description available Search pathways
Cadherin Cadherin IPR002126 ENSMUSP00000116798 Smart 30
115 Description available Search pathways
Cadherin Cadherin IPR002126 ENSMUSP00000116798 Prosite_profiles 24
117 Description available Search pathways

 Availability Details 
Availability Progeny Cryopreserved