Slitrk5 - SNV Details



 Gene Information 
Gene Name Slitrk5
Old Gene Names for Slitrk5 2610019d03rik
Gene Description SLIT and NTRK-like family, member 5 [Source:MGI Symbol;Acc:MGI:2679448]
Uniprot Name
CCDS Name
Gene GO
integral to membrane; axonogenesis; protein binding; molecular_function
Homolog in other species SLITRK5
Omim http://omim.org/entry/609680
Immgen Expression
MEDIAN(HIGHER IN NK GROUP, T.8MEM.LN, TGD.SPT.4NVE.PP, T.4FP3+25+.SP)
Gnf Expression
MEDIAN(HIGH IN CEREBELLUM, OLFACTORYBULB, DORSALROOTGANGLION, HIPPOCAMPUS, AMYGDALA, FRONTALCORTEX, CEREBRALCORTEX, CORTEX, PREOPTIC, SUBSTANTIANIGRA, HYPOTHALAMUS)
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000033214
Chromosome 14
Coordinate 111,679,000     (Assembly: GRCm38)    
Ref Base C
Codon Change Cat/Aat
Var Base A
Zygosity Heterozygous
Read Depth 58
Allele Frequency
C:R0.55
A:V0.45
Amino Acid Position 19
Amino Acid Change H->N (Histidine -> Asparagine)
Sample ID IGL01680
Median Base Quality 37
Backgrounds C57BL/6NCrl
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 38 Other Mutations

 Predictions 
Polyphen Score 0.72
Polyphen Prediction Possibly damaging
Sift Score 0.09
Sift Prediction tolerated

 Availability Details 
Availability