Lztr1 - SNV Details



 Gene Information 
Gene Name Lztr1
Old Gene Names for Lztr1 1200003e21rik , Ai591627 , Aw550890
Gene Description leucine-zipper-like transcriptional regulator, 1 [Source:MGI Symbol;Acc:MGI:1914113]
Uniprot Name
CCDS Name
Gene GO
protein binding; cellular_component; biological_process; molecular_function
Homolog in other species LZTR1
Omim http://omim.org/entry/600574
Immgen Expression
HIGH(LOWER IN GN.BM)
Gnf Expression
HIGH(HIGHER IN IMM GROUP, NS GROUPS)
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000022761
Chromosome 16
Coordinate 17,522,391     (Assembly: GRCm38)    
Ref Base G
Codon Change tGt/tAt
Var Base A
Zygosity Heterozygous
Read Depth 35
Allele Frequency
G:R0.46
A:V0.54
Amino Acid Position 452
Amino Acid Change C->Y (Cysteine -> Tyrosine)
Sample ID IGL01514
Median Base Quality 39
Backgrounds C57BL/6NCrl
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 35 Other Mutations

 Predictions 
Polyphen Score 0.04
Polyphen Prediction Benign
Sift Score 0.47
Sift Prediction tolerated

 Protein domains 
ENSMUSP00000023444:
Image provided by Ensembl

Full name Short name Interpro SeqRegionName Type Start End Description Search pathways
BTB/POZ BTB_POZ IPR013069 ENSMUSP00000023444 Pfam 434
558 Description available Search pathways
BTB/POZ fold BTB/POZ_fold IPR011333 ENSMUSP00000023444 Superfamily 411
571 Description available Search pathways
BTB/POZ-like BTB/POZ-like IPR000210 ENSMUSP00000023444 Smart 440
571 Description available Search pathways
BTB/POZ-like BTB/POZ-like IPR000210 ENSMUSP00000023444 Prosite_profiles 440
534 Description available Search pathways

 Availability Details 
Availability Progeny Cryopreserved