Trank1 - SNV Details



 Gene Information 
Gene Name Trank1
Old Gene Names for Trank1 C030048j01rik , A230061d21rik , Gm187 , Lba1
Gene Description tetratricopeptide repeat and ankyrin repeat containing 1 [Source:MGI Symbol;Acc:MGI:1341834]
Uniprot Name
CCDS Name
Gene GO
protein binding; cellular_component; ATP binding; biological_process; molecular_function
Homolog in other species TRANK1
Novel Yes

 Mutation Information 
Mutation Type Non-synonymous
Ensembl ID ENSMUSG00000062296
Chromosome 9
Coordinate 111,373,544     (Assembly: GRCm38)    
Ref Base A
Codon Change gAg/gGg
Var Base G
Zygosity Heterozygous
Read Depth 191
Allele Frequency
A:R0.53
G:V0.47
Amino Acid Position 1659
Amino Acid Change E->G (Glutamic acid -> Glycine)
Sample ID IGL01504
Median Base Quality 39
Backgrounds C57BL/6NCrl
Source Australian Phenomics Facility (APF-G1)
Other variants in this mouse 21 Other Mutations

 Predictions 
Polyphen Score 0.99
Polyphen Prediction Probably damaging
Sift Score 0.03
Sift Prediction deleterious

 Protein domains 
ENSMUSP00000077697:
Image provided by Ensembl

Full name Short name Interpro SeqRegionName Type Start End Description Search pathways
P-loop containing nucleoside triphosphate hydrolase P-loop_NTPase IPR027417 ENSMUSP00000077697 Superfamily 1102
1766 Description available Search pathways

 Availability Details 
Availability Progeny Cryopreserved , Cryopreserved